Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Gm27275-201ENSMUST00000184318 272 ntBASIC18.4■□□□□ 0.54
Ssr1Q9CY50 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ssr1Q9CY50 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Gm6576-201ENSMUST00000169678 883 ntBASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr1Q9CY50 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr1Q9CY50 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr1Q9CY50 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Gm11643-201ENSMUST00000119578 864 ntBASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Gm13158-201ENSMUST00000122007 736 ntBASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr1Q9CY50 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms