Protein–RNA interactions for Protein: Q9CPZ1

Ccdc198, Uncharacterized protein CCDC198, mousemouse

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc198Q9CPZ1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Gm10418-201ENSMUST00000100943 576 ntBASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Mir6982-201ENSMUST00000184354 68 ntBASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc198Q9CPZ1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Gm42545-201ENSMUST00000202755 922 ntBASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc198Q9CPZ1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc198Q9CPZ1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc198Q9CPZ1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Gm43183-201ENSMUST00000200632 547 ntBASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc198Q9CPZ1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Gm715-201ENSMUST00000117865 831 ntBASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc198Q9CPZ1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc198Q9CPZ1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc198Q9CPZ1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc198Q9CPZ1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc198Q9CPZ1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc198Q9CPZ1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc198Q9CPZ1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc198Q9CPZ1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms