Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gm10566-201ENSMUST00000086739 996 ntBASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpgs1Q99MS8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpgs1Q99MS8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpgs1Q99MS8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpgs1Q99MS8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpgs1Q99MS8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpgs1Q99MS8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpgs1Q99MS8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpgs1Q99MS8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms