Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Fst-202ENSMUST00000223640 2612 ntBASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx6-1Q99MA9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Nkx6-1Q99MA9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx6-1Q99MA9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.83■□□□□ 0.13
Nkx6-1Q99MA9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Nkx6-1Q99MA9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx6-1Q99MA9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx6-1Q99MA9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx6-1Q99MA9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.83■□□□□ 0.13
Nkx6-1Q99MA9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Mir5131-201ENSMUST00000175426 93 ntBASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-1Q99MA9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Idnk-204ENSMUST00000226010 1898 ntBASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Gm8000-201ENSMUST00000188378 592 ntBASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Gm2213-201ENSMUST00000197485 688 ntBASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx6-1Q99MA9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Gm7862-201ENSMUST00000121461 292 ntBASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx6-1Q99MA9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms