Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Timm23-208ENSMUST00000226683 750 ntBASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha8Q91Y12 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Gm715-201ENSMUST00000117865 831 ntBASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdha8Q91Y12 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Gm12085-201ENSMUST00000119263 940 ntBASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha8Q91Y12 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha8Q91Y12 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Gm17661-201ENSMUST00000170317 270 ntBASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Gm38027-201ENSMUST00000192315 235 ntBASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha8Q91Y12 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms