Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc9Q8VC31 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Idnk-204ENSMUST00000226010 1898 ntBASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Mir7075-201ENSMUST00000184187 82 ntBASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc9Q8VC31 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc9Q8VC31 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc9Q8VC31 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc9Q8VC31 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Gm12251-201ENSMUST00000117893 792 ntBASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms