Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox30Q8CGW4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Gm9731-201ENSMUST00000209480 747 ntBASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox30Q8CGW4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox30Q8CGW4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Il3ra-202ENSMUST00000223589 738 ntBASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox30Q8CGW4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sox30Q8CGW4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox30Q8CGW4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox30Q8CGW4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox30Q8CGW4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms