Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Gm10517-202ENSMUST00000192970 758 ntBASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vcpip1Q8CDG3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcpip1Q8CDG3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcpip1Q8CDG3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcpip1Q8CDG3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vcpip1Q8CDG3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms