Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Gm26571-201ENSMUST00000181399 666 ntBASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Gm10138-203ENSMUST00000206952 366 ntBASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Rab3c-203ENSMUST00000224180 967 ntBASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Gm13148-201ENSMUST00000118892 745 ntBASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lysmd4Q8CC84 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd4Q8CC84 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Gm15375-201ENSMUST00000119510 849 ntBASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd4Q8CC84 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd4Q8CC84 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd4Q8CC84 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd4Q8CC84 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Lysmd4Q8CC84 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd4Q8CC84 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms