Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srrm3Q80WV7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Gm21362-201ENSMUST00000194272 928 ntBASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srrm3Q80WV7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srrm3Q80WV7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Srrm3Q80WV7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Srrm3Q80WV7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Srrm3Q80WV7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Gm37055-201ENSMUST00000191866 133 ntBASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Srrm3Q80WV7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms