Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim62Q80V85 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim62Q80V85 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim62Q80V85 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim62Q80V85 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim62Q80V85 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.56■□□□□ 0.4
Trim62Q80V85 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Gm27389-201ENSMUST00000183622 195 ntBASIC17.56■□□□□ 0.4
Trim62Q80V85 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim62Q80V85 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim62Q80V85 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim62Q80V85 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim62Q80V85 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim62Q80V85 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim62Q80V85 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.55■□□□□ 0.4
Trim62Q80V85 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trim62Q80V85 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim62Q80V85 Gm22697-201ENSMUST00000175194 63 ntBASIC17.55■□□□□ 0.4
Trim62Q80V85 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trim62Q80V85 Gm18032-201ENSMUST00000222541 538 ntBASIC17.55■□□□□ 0.4
Trim62Q80V85 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim62Q80V85 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim62Q80V85 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.54■□□□□ 0.4
Trim62Q80V85 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim62Q80V85 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Trim62Q80V85 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim62Q80V85 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Trim62Q80V85 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim62Q80V85 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trim62Q80V85 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim62Q80V85 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim62Q80V85 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim62Q80V85 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim62Q80V85 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim62Q80V85 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim62Q80V85 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.52■□□□□ 0.4
Trim62Q80V85 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms