Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc85aQ5SP85 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Gm11594-201ENSMUST00000122313 162 ntBASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc85aQ5SP85 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc85aQ5SP85 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Mir5131-201ENSMUST00000175426 93 ntBASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.67■□□□□ 0.58
Ccdc85aQ5SP85 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Gm1401-201ENSMUST00000122048 772 ntBASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms