Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Gm11249-201ENSMUST00000117071 859 ntBASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7d-3Q5R1I1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav7d-3Q5R1I1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav7d-3Q5R1I1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms