Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Gm42642-201ENSMUST00000200683 355 ntBASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trdv2-2Q5R1A4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trdv2-2Q5R1A4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trdv2-2Q5R1A4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Gm7291-201ENSMUST00000199147 382 ntBASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trdv2-2Q5R1A4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms