Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smn1P97801 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smn1P97801 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.58□□□□□ -0.07
Smn1P97801 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Smn1P97801 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smn1P97801 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smn1P97801 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Smn1P97801 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.58□□□□□ -0.08
Smn1P97801 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
Smn1P97801 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.58□□□□□ -0.08
Smn1P97801 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smn1P97801 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smn1P97801 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smn1P97801 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smn1P97801 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smn1P97801 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smn1P97801 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smn1P97801 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smn1P97801 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smn1P97801 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smn1P97801 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smn1P97801 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.57□□□□□ -0.08
Smn1P97801 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smn1P97801 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smn1P97801 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.57□□□□□ -0.08
Smn1P97801 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smn1P97801 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.57□□□□□ -0.08
Smn1P97801 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smn1P97801 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.56□□□□□ -0.08
Smn1P97801 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.56□□□□□ -0.08
Smn1P97801 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.56□□□□□ -0.08
Smn1P97801 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.56□□□□□ -0.08
Smn1P97801 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smn1P97801 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.56□□□□□ -0.08
Smn1P97801 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smn1P97801 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.55□□□□□ -0.08
Smn1P97801 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.55□□□□□ -0.08
Smn1P97801 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Smn1P97801 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.55□□□□□ -0.08
Smn1P97801 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Smn1P97801 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.55□□□□□ -0.08
Smn1P97801 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Gm26571-201ENSMUST00000181399 666 ntBASIC14.55□□□□□ -0.08
Smn1P97801 Gm26524-201ENSMUST00000192339 390 ntBASIC14.55□□□□□ -0.08
Smn1P97801 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.55□□□□□ -0.08
Smn1P97801 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smn1P97801 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smn1P97801 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Smn1P97801 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smn1P97801 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smn1P97801 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smn1P97801 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smn1P97801 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smn1P97801 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms