Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Gm10849-201ENSMUST00000100397 618 ntBASIC14.35□□□□□ -0.11
Cpne2P59108 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpne2P59108 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne2P59108 Gm6365-201ENSMUST00000054711 744 ntBASIC14.35□□□□□ -0.11
Cpne2P59108 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne2P59108 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne2P59108 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne2P59108 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne2P59108 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.35□□□□□ -0.11
Cpne2P59108 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cpne2P59108 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne2P59108 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne2P59108 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.34□□□□□ -0.11
Cpne2P59108 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne2P59108 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpne2P59108 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Cpne2P59108 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpne2P59108 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.34□□□□□ -0.11
Cpne2P59108 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cpne2P59108 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne2P59108 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne2P59108 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.33□□□□□ -0.11
Cpne2P59108 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.33□□□□□ -0.11
Cpne2P59108 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne2P59108 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cpne2P59108 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Gm10418-201ENSMUST00000100943 576 ntBASIC14.33□□□□□ -0.12
Cpne2P59108 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cpne2P59108 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpne2P59108 Gm8495-201ENSMUST00000188740 694 ntBASIC14.33□□□□□ -0.12
Cpne2P59108 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.33□□□□□ -0.12
Cpne2P59108 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpne2P59108 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Cpne2P59108 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.33□□□□□ -0.12
Cpne2P59108 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne2P59108 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.33□□□□□ -0.12
Cpne2P59108 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne2P59108 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cpne2P59108 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cpne2P59108 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
Cpne2P59108 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.32□□□□□ -0.12
Cpne2P59108 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cpne2P59108 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.32□□□□□ -0.12
Cpne2P59108 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne2P59108 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.32□□□□□ -0.12
Cpne2P59108 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cpne2P59108 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne2P59108 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpne2P59108 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.31□□□□□ -0.12
Cpne2P59108 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms