Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm5643-201ENSMUST00000117081 966 ntBASIC19.02■□□□□ 0.64
Sdc2P43407 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.02■□□□□ 0.64
Sdc2P43407 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc2P43407 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc2P43407 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.02■□□□□ 0.64
Sdc2P43407 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdc2P43407 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdc2P43407 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdc2P43407 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdc2P43407 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdc2P43407 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Sdc2P43407 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Sdc2P43407 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.01■□□□□ 0.63
Sdc2P43407 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Sdc2P43407 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc2P43407 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Sdc2P43407 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sdc2P43407 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19■□□□□ 0.63
Sdc2P43407 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sdc2P43407 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sdc2P43407 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19■□□□□ 0.63
Sdc2P43407 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19■□□□□ 0.63
Sdc2P43407 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc2P43407 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19■□□□□ 0.63
Sdc2P43407 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.99■□□□□ 0.63
Sdc2P43407 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sdc2P43407 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.99■□□□□ 0.63
Sdc2P43407 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.99■□□□□ 0.63
Sdc2P43407 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.99■□□□□ 0.63
Sdc2P43407 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Sdc2P43407 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc2P43407 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.98■□□□□ 0.63
Sdc2P43407 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Gm15378-201ENSMUST00000121894 207 ntBASIC18.98■□□□□ 0.63
Sdc2P43407 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sdc2P43407 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sdc2P43407 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sdc2P43407 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Sdc2P43407 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sdc2P43407 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdc2P43407 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sdc2P43407 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Sdc2P43407 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Gm10698-201ENSMUST00000182663 604 ntBASIC18.97■□□□□ 0.63
Sdc2P43407 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Sdc2P43407 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.97■□□□□ 0.63
Sdc2P43407 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdc2P43407 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms