Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HmgclP38060 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.7■□□□□ 0.26
HmgclP38060 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.69■□□□□ 0.26
HmgclP38060 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HmgclP38060 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.69■□□□□ 0.26
HmgclP38060 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HmgclP38060 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HmgclP38060 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.69■□□□□ 0.26
HmgclP38060 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HmgclP38060 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
HmgclP38060 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.69■□□□□ 0.26
HmgclP38060 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HmgclP38060 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HmgclP38060 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HmgclP38060 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HmgclP38060 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HmgclP38060 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HmgclP38060 Gm7370-201ENSMUST00000219471 767 ntBASIC16.68■□□□□ 0.26
HmgclP38060 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HmgclP38060 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HmgclP38060 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.68■□□□□ 0.26
HmgclP38060 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
HmgclP38060 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HmgclP38060 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HmgclP38060 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HmgclP38060 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HmgclP38060 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HmgclP38060 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HmgclP38060 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
HmgclP38060 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.67■□□□□ 0.26
HmgclP38060 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HmgclP38060 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.67■□□□□ 0.26
HmgclP38060 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HmgclP38060 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HmgclP38060 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HmgclP38060 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HmgclP38060 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.67■□□□□ 0.26
HmgclP38060 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HmgclP38060 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.66■□□□□ 0.26
HmgclP38060 Gm16061-201ENSMUST00000122167 857 ntBASIC16.66■□□□□ 0.26
HmgclP38060 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Mir6982-201ENSMUST00000184354 68 ntBASIC16.66■□□□□ 0.26
HmgclP38060 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HmgclP38060 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HmgclP38060 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HmgclP38060 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HmgclP38060 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.65■□□□□ 0.26
HmgclP38060 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HmgclP38060 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.65■□□□□ 0.26
HmgclP38060 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.65■□□□□ 0.26
HmgclP38060 Gm15565-201ENSMUST00000118890 427 ntBASIC16.65■□□□□ 0.26
HmgclP38060 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.65■□□□□ 0.26
HmgclP38060 Gm13474-201ENSMUST00000122466 815 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms