Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LdlrP35951 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.88■□□□□ 0.29
LdlrP35951 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.88■□□□□ 0.29
LdlrP35951 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.88■□□□□ 0.29
LdlrP35951 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.88■□□□□ 0.29
LdlrP35951 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LdlrP35951 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LdlrP35951 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LdlrP35951 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.87■□□□□ 0.29
LdlrP35951 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.87■□□□□ 0.29
LdlrP35951 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.87■□□□□ 0.29
LdlrP35951 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.87■□□□□ 0.29
LdlrP35951 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LdlrP35951 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LdlrP35951 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Gm13158-201ENSMUST00000122007 736 ntBASIC16.86■□□□□ 0.29
LdlrP35951 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.86■□□□□ 0.29
LdlrP35951 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LdlrP35951 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.86■□□□□ 0.29
LdlrP35951 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LdlrP35951 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.85■□□□□ 0.29
LdlrP35951 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.85■□□□□ 0.29
LdlrP35951 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.85■□□□□ 0.29
LdlrP35951 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LdlrP35951 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.85■□□□□ 0.29
LdlrP35951 Mir6349-201ENSMUST00000184059 97 ntBASIC16.85■□□□□ 0.29
LdlrP35951 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Gm9987-201ENSMUST00000069768 567 ntBASIC16.85■□□□□ 0.29
LdlrP35951 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LdlrP35951 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LdlrP35951 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LdlrP35951 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LdlrP35951 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.85■□□□□ 0.29
LdlrP35951 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.84■□□□□ 0.29
LdlrP35951 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.84■□□□□ 0.29
LdlrP35951 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.84■□□□□ 0.29
LdlrP35951 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LdlrP35951 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms