Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BrafP28028 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BrafP28028 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
BrafP28028 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
BrafP28028 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BrafP28028 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.58■□□□□ 0.24
BrafP28028 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.58■□□□□ 0.24
BrafP28028 Gm12382-201ENSMUST00000122005 922 ntBASIC16.58■□□□□ 0.24
BrafP28028 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.58■□□□□ 0.24
BrafP28028 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BrafP28028 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
BrafP28028 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BrafP28028 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.57■□□□□ 0.24
BrafP28028 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.57■□□□□ 0.24
BrafP28028 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Gm13401-201ENSMUST00000117074 291 ntBASIC16.57■□□□□ 0.24
BrafP28028 Gm6576-201ENSMUST00000169678 883 ntBASIC16.57■□□□□ 0.24
BrafP28028 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Gm42545-201ENSMUST00000202755 922 ntBASIC16.57■□□□□ 0.24
BrafP28028 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.57■□□□□ 0.24
BrafP28028 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BrafP28028 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
BrafP28028 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.57■□□□□ 0.24
BrafP28028 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
BrafP28028 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.56■□□□□ 0.24
BrafP28028 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Gm5643-201ENSMUST00000117081 966 ntBASIC16.56■□□□□ 0.24
BrafP28028 Gm15378-201ENSMUST00000121894 207 ntBASIC16.56■□□□□ 0.24
BrafP28028 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.56■□□□□ 0.24
BrafP28028 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.56■□□□□ 0.24
BrafP28028 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.56■□□□□ 0.24
BrafP28028 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.56■□□□□ 0.24
BrafP28028 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.56■□□□□ 0.24
BrafP28028 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BrafP28028 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
BrafP28028 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BrafP28028 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BrafP28028 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BrafP28028 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BrafP28028 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BrafP28028 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.55■□□□□ 0.24
BrafP28028 Gm10653-202ENSMUST00000139570 835 ntBASIC16.55■□□□□ 0.24
BrafP28028 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BrafP28028 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BrafP28028 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
BrafP28028 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BrafP28028 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BrafP28028 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BrafP28028 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
BrafP28028 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BrafP28028 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.54■□□□□ 0.24
BrafP28028 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.54■□□□□ 0.24
BrafP28028 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.54■□□□□ 0.24
BrafP28028 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.54■□□□□ 0.24
BrafP28028 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BrafP28028 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms