Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Pde6aP27664 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.65■□□□□ 0.74
Pde6aP27664 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6aP27664 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pde6aP27664 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Pde6aP27664 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pde6aP27664 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.64■□□□□ 0.73
Pde6aP27664 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Pde6aP27664 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.64■□□□□ 0.73
Pde6aP27664 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pde6aP27664 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pde6aP27664 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6aP27664 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Pde6aP27664 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pde6aP27664 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.63■□□□□ 0.73
Pde6aP27664 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Gm13836-201ENSMUST00000121159 501 ntBASIC19.63■□□□□ 0.73
Pde6aP27664 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.63■□□□□ 0.73
Pde6aP27664 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.63■□□□□ 0.73
Pde6aP27664 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.63■□□□□ 0.73
Pde6aP27664 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.63■□□□□ 0.73
Pde6aP27664 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6aP27664 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pde6aP27664 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.62■□□□□ 0.73
Pde6aP27664 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Pde6aP27664 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.62■□□□□ 0.73
Pde6aP27664 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pde6aP27664 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.62■□□□□ 0.73
Pde6aP27664 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.62■□□□□ 0.73
Pde6aP27664 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pde6aP27664 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.62■□□□□ 0.73
Pde6aP27664 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pde6aP27664 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6aP27664 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.61■□□□□ 0.73
Pde6aP27664 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.61■□□□□ 0.73
Pde6aP27664 Gm13186-201ENSMUST00000118031 316 ntBASIC19.61■□□□□ 0.73
Pde6aP27664 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Pde6aP27664 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6aP27664 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pde6aP27664 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6aP27664 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms