Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Usp53P15975 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Usp53P15975 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp53P15975 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp53P15975 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp53P15975 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp53P15975 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.63■□□□□ 0.73
Usp53P15975 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp53P15975 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp53P15975 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp53P15975 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp53P15975 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp53P15975 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp53P15975 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp53P15975 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp53P15975 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Usp53P15975 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp53P15975 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp53P15975 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp53P15975 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp53P15975 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Gm13186-201ENSMUST00000118031 316 ntBASIC19.61■□□□□ 0.73
Usp53P15975 Gm7284-201ENSMUST00000131667 944 ntBASIC19.61■□□□□ 0.73
Usp53P15975 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp53P15975 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp53P15975 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Usp53P15975 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Mir770-201ENSMUST00000103252 94 ntBASIC19.6■□□□□ 0.73
Usp53P15975 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp53P15975 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp53P15975 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Usp53P15975 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp53P15975 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp53P15975 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp53P15975 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp53P15975 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp53P15975 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp53P15975 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp53P15975 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp53P15975 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp53P15975 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp53P15975 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp53P15975 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp53P15975 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Usp53P15975 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp53P15975 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.58■□□□□ 0.72
Usp53P15975 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms