Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.56■□□□□ 0.72
Calm3P0DP28 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Calm3P0DP28 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.55■□□□□ 0.72
Calm3P0DP28 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Calm3P0DP28 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Calm3P0DP28 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.55■□□□□ 0.72
Calm3P0DP28 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Calm3P0DP28 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Calm3P0DP28 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Calm3P0DP28 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.54■□□□□ 0.72
Calm3P0DP28 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.54■□□□□ 0.72
Calm3P0DP28 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Calm3P0DP28 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Calm3P0DP28 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Calm3P0DP28 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Actl10-202ENSMUST00000226583 1501 ntBASIC19.54■□□□□ 0.72
Calm3P0DP28 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Calm3P0DP28 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.54■□□□□ 0.72
Calm3P0DP28 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Calm3P0DP28 Gm13836-201ENSMUST00000121159 501 ntBASIC19.53■□□□□ 0.72
Calm3P0DP28 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.53■□□□□ 0.72
Calm3P0DP28 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.53■□□□□ 0.72
Calm3P0DP28 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Calm3P0DP28 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Calm3P0DP28 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Calm3P0DP28 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.52■□□□□ 0.72
Calm3P0DP28 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Calm3P0DP28 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.52■□□□□ 0.72
Calm3P0DP28 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Calm3P0DP28 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.52■□□□□ 0.72
Calm3P0DP28 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Calm3P0DP28 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Calm3P0DP28 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Calm3P0DP28 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.51■□□□□ 0.71
Calm3P0DP28 Gm18101-201ENSMUST00000215769 548 ntBASIC19.51■□□□□ 0.71
Calm3P0DP28 Gm18032-201ENSMUST00000222541 538 ntBASIC19.51■□□□□ 0.71
Calm3P0DP28 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.51■□□□□ 0.71
Calm3P0DP28 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Calm3P0DP28 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Calm3P0DP28 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Calm3P0DP28 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Calm3P0DP28 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms