Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ShdO88834 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ShdO88834 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShdO88834 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShdO88834 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShdO88834 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ShdO88834 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShdO88834 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.33■□□□□ 0.36
ShdO88834 Gm15565-201ENSMUST00000118890 427 ntBASIC17.33■□□□□ 0.36
ShdO88834 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ShdO88834 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.33■□□□□ 0.36
ShdO88834 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.33■□□□□ 0.36
ShdO88834 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShdO88834 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.33■□□□□ 0.36
ShdO88834 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ShdO88834 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShdO88834 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShdO88834 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.32■□□□□ 0.36
ShdO88834 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ShdO88834 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ShdO88834 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.32■□□□□ 0.36
ShdO88834 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ShdO88834 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShdO88834 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ShdO88834 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShdO88834 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShdO88834 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
ShdO88834 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ShdO88834 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.31■□□□□ 0.36
ShdO88834 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.31■□□□□ 0.36
ShdO88834 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShdO88834 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.31■□□□□ 0.36
ShdO88834 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.31■□□□□ 0.36
ShdO88834 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShdO88834 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShdO88834 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
ShdO88834 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ShdO88834 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.31■□□□□ 0.36
ShdO88834 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShdO88834 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ShdO88834 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ShdO88834 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ShdO88834 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShdO88834 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.3■□□□□ 0.36
ShdO88834 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ShdO88834 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.3■□□□□ 0.36
ShdO88834 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.3■□□□□ 0.36
ShdO88834 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ShdO88834 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ShdO88834 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShdO88834 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ShdO88834 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ShdO88834 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ShdO88834 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.29■□□□□ 0.36
ShdO88834 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.29■□□□□ 0.36
ShdO88834 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Gm30025-201ENSMUST00000218555 728 ntBASIC17.29■□□□□ 0.36
ShdO88834 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ShdO88834 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ShdO88834 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ShdO88834 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.29■□□□□ 0.36
ShdO88834 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms