Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rdh5O55240 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.08■□□□□ 0.16
Rdh5O55240 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rdh5O55240 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.07■□□□□ 0.16
Rdh5O55240 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rdh5O55240 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.07■□□□□ 0.16
Rdh5O55240 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.07■□□□□ 0.16
Rdh5O55240 Odf3b-204ENSMUST00000227834 930 ntBASIC16.07■□□□□ 0.16
Rdh5O55240 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.07■□□□□ 0.16
Rdh5O55240 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rdh5O55240 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rdh5O55240 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rdh5O55240 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rdh5O55240 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.06■□□□□ 0.16
Rdh5O55240 Gm7977-201ENSMUST00000193787 748 ntBASIC16.06■□□□□ 0.16
Rdh5O55240 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.06■□□□□ 0.16
Rdh5O55240 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rdh5O55240 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.06■□□□□ 0.16
Rdh5O55240 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.06■□□□□ 0.16
Rdh5O55240 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.06■□□□□ 0.16
Rdh5O55240 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rdh5O55240 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.05■□□□□ 0.16
Rdh5O55240 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rdh5O55240 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.05■□□□□ 0.16
Rdh5O55240 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Gm3375-201ENSMUST00000203929 796 ntBASIC16.05■□□□□ 0.16
Rdh5O55240 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.05■□□□□ 0.16
Rdh5O55240 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh5O55240 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rdh5O55240 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.04■□□□□ 0.16
Rdh5O55240 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.04■□□□□ 0.16
Rdh5O55240 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.04■□□□□ 0.16
Rdh5O55240 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.04■□□□□ 0.16
Rdh5O55240 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.04■□□□□ 0.16
Rdh5O55240 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.04■□□□□ 0.16
Rdh5O55240 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh5O55240 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Rdh5O55240 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.03■□□□□ 0.16
Rdh5O55240 Il3ra-202ENSMUST00000223589 738 ntBASIC16.03■□□□□ 0.16
Rdh5O55240 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh5O55240 Gm5417-201ENSMUST00000079706 384 ntBASIC16.03■□□□□ 0.16
Rdh5O55240 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms