Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
E030018B13RikJ3QMS9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
E030018B13RikJ3QMS9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
E030018B13RikJ3QMS9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
E030018B13RikJ3QMS9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
E030018B13RikJ3QMS9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
E030018B13RikJ3QMS9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Phf7-203ENSMUST00000226565 1971 ntBASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
E030018B13RikJ3QMS9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Gm11355-201ENSMUST00000121120 306 ntBASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Gm44450-201ENSMUST00000199528 114 ntBASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
E030018B13RikJ3QMS9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms