Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Gm27494-201ENSMUST00000184735 189 ntBASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a3E9PWQ3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Mir6420-201ENSMUST00000185032 102 ntBASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col6a3E9PWQ3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a3E9PWQ3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a3E9PWQ3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Gm9899-201ENSMUST00000065519 555 ntBASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Mir3547-201ENSMUST00000175461 88 ntBASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.94■□□□□ 0.3
Col6a3E9PWQ3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Gm43433-201ENSMUST00000196573 481 ntBASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Gm43630-201ENSMUST00000201550 776 ntBASIC16.93■□□□□ 0.3
Col6a3E9PWQ3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a3E9PWQ3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms