Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Gm15375-201ENSMUST00000119510 849 ntBASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28043E0CXC2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28043E0CXC2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28043E0CXC2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17■□□□□ 0.31
Gm28043E0CXC2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17■□□□□ 0.31
Gm28043E0CXC2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17■□□□□ 0.31
Gm28043E0CXC2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17■□□□□ 0.31
Gm28043E0CXC2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Gm28043E0CXC2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28043E0CXC2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Idnk-204ENSMUST00000226010 1898 ntBASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Gm10418-201ENSMUST00000100943 576 ntBASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Gm5643-201ENSMUST00000117081 966 ntBASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.99■□□□□ 0.31
Gm28043E0CXC2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Gm28043E0CXC2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms