Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.47■□□□□ 0.71
Syce3B5KM66 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syce3B5KM66 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Syce3B5KM66 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Syce3B5KM66 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Syce3B5KM66 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Syce3B5KM66 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.46■□□□□ 0.71
Syce3B5KM66 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Syce3B5KM66 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syce3B5KM66 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Syce3B5KM66 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Syce3B5KM66 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.45■□□□□ 0.7
Syce3B5KM66 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Syce3B5KM66 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.45■□□□□ 0.7
Syce3B5KM66 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.45■□□□□ 0.7
Syce3B5KM66 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.45■□□□□ 0.7
Syce3B5KM66 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.45■□□□□ 0.7
Syce3B5KM66 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Syce3B5KM66 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syce3B5KM66 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.44■□□□□ 0.7
Syce3B5KM66 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
Syce3B5KM66 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Syce3B5KM66 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Syce3B5KM66 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syce3B5KM66 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Syce3B5KM66 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Syce3B5KM66 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Syce3B5KM66 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syce3B5KM66 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Syce3B5KM66 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Syce3B5KM66 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Syce3B5KM66 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.42■□□□□ 0.7
Syce3B5KM66 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.42■□□□□ 0.7
Syce3B5KM66 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.42■□□□□ 0.7
Syce3B5KM66 Gm10493-201ENSMUST00000097270 612 ntBASIC19.42■□□□□ 0.7
Syce3B5KM66 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Syce3B5KM66 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms