Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12-1A0N8R1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12-1A0N8R1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Gm12382-201ENSMUST00000122005 922 ntBASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Gm24841-201ENSMUST00000158676 357 ntBASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Gm37292-201ENSMUST00000192062 758 ntBASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12-1A0N8R1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Gm10517-202ENSMUST00000192970 758 ntBASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Gm10602-201ENSMUST00000098239 609 ntBASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12-1A0N8R1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav12-1A0N8R1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12-1A0N8R1 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms