Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Prob1-201ENSMUST00000097619 3021 ntBASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm3880A0A1B0GSB3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm3880A0A1B0GSB3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms