Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-4A0A0G2JG37 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-4A0A0G2JG37 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9d-4A0A0G2JG37 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9d-4A0A0G2JG37 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9d-4A0A0G2JG37 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav9d-4A0A0G2JG37 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-4A0A0G2JG37 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9d-4A0A0G2JG37 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms