Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Mtag2-201ENSMUST00000058665 714 ntBASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm10849-201ENSMUST00000100397 618 ntBASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm13401-201ENSMUST00000117074 291 ntBASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.71□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm11927-201ENSMUST00000118472 759 ntBASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mir2861-201ENSMUST00000175539 82 ntBASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms