Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Igkv4-53A0A0G2JFC6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm10653-202ENSMUST00000139570 835 ntBASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm12382-201ENSMUST00000122005 922 ntBASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm37292-201ENSMUST00000192062 758 ntBASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Gm5643-201ENSMUST00000117081 966 ntBASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Igkv4-53A0A0G2JFC6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms