Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4-3A0A0B4J1K1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4-3A0A0B4J1K1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4-3A0A0B4J1K1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4-3A0A0B4J1K1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav4-3A0A0B4J1K1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm13146-201ENSMUST00000118508 780 ntBASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm15546-201ENSMUST00000122095 826 ntBASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4-3A0A0B4J1K1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4-3A0A0B4J1K1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav4-3A0A0B4J1K1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav4-3A0A0B4J1K1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav4-3A0A0B4J1K1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms