Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav11A0A0B4J1J9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav11A0A0B4J1J9 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav11A0A0B4J1J9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Gm2399-201ENSMUST00000104944 225 ntBASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Gm6365-201ENSMUST00000054711 744 ntBASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Zfp783-201ENSMUST00000095946 670 ntBASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav11A0A0B4J1J9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms