Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm37292-201ENSMUST00000192062 758 ntBASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav21-dv12A0A075B6C4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm12527-201ENSMUST00000117967 564 ntBASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm29257-201ENSMUST00000186115 639 ntBASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm4974-201ENSMUST00000209974 875 ntBASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav21-dv12A0A075B6C4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm10517-202ENSMUST00000192970 758 ntBASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.05□□□□□ -0.32
Trav21-dv12A0A075B6C4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav21-dv12A0A075B6C4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms