Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Gm15372-201ENSMUST00000120729 834 ntBASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Gm18733-201ENSMUST00000173950 856 ntBASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8n-2A0A075B633 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8n-2A0A075B633 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Phf7-203ENSMUST00000226565 1971 ntBASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8n-2A0A075B633 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8n-2A0A075B633 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Gm11452-201ENSMUST00000122376 690 ntBASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8n-2A0A075B633 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms