Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav6n-5A0A075B621 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-5A0A075B621 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-5A0A075B621 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Trav6n-5A0A075B621 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6n-5A0A075B621 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Trav6n-5A0A075B621 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms