Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 MAPK10-350ENST00000641777 965 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 IMMTP1-201ENST00000435590 2219 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 CASC19-246ENST00000641625 1606 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC013488.1-201ENST00000526618 1838 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AL139805.1-201ENST00000407837 289 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 OSTCP4-201ENST00000424397 449 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AL139158.1-201ENST00000424719 340 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC023141.6-201ENST00000429418 337 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 RN7SL552P-201ENST00000462094 276 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC092902.1-201ENST00000486999 259 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 KHDC1P1-201ENST00000511053 508 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 RNU6-760P-201ENST00000516078 97 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC112503.2-201ENST00000609005 552 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AL356608.1-201ENST00000610034 820 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AP000770.2-201ENST00000623694 100 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AL132640.3-201ENST00000630473 177 ntBASIC6.45□□□□□ -1.38
DKK3Q9UBP4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.45□□□□□ -1.38
DKK3Q9UBP4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MTHFD2P5-201ENST00000320415 844 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 RPL11P4-201ENST00000332269 436 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MTATP6P31-201ENST00000406985 692 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 CBX1P3-201ENST00000413296 527 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MRPS21P2-201ENST00000424704 264 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MGAT2P2-201ENST00000427194 797 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 RPL34P27-201ENST00000428810 349 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MTND4LP14-201ENST00000429447 288 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MTND4LP7-201ENST00000431728 294 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MTCYBP15-201ENST00000433123 1127 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 POU5F1P5-201ENST00000445059 658 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MTND2P30-201ENST00000456663 382 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 RPL31P53-201ENST00000457065 348 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 ATP5G1P3-201ENST00000463301 410 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms