Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 ABCA11P-202ENST00000504019 2110 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 MIR937-201ENST00000401271 86 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL096711.1-201ENST00000404780 554 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 RN7SKP161-201ENST00000411110 305 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 RPS21P8-201ENST00000413365 247 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 BX284632.2-201ENST00000421091 399 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AJ239321.1-201ENST00000424255 564 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 BX323845.3-201ENST00000428215 527 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL512605.1-202ENST00000441919 381 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL359955.2-201ENST00000445380 353 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 FTLP8-201ENST00000446770 267 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 C1DP3-201ENST00000455013 423 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL356390.1-201ENST00000455684 397 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 ATG10-AS1-201ENST00000504846 648 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC106800.3-201ENST00000511389 308 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AP000648.1-201ENST00000529682 397 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AP001858.2-201ENST00000536213 601 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC022404.1-201ENST00000555320 273 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 DPPA3P2-202ENST00000557188 1219 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AC090651.1-201ENST00000567865 634 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 COX6CP7-201ENST00000597056 208 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL359704.2-201ENST00000604335 521 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL031601.1-201ENST00000605702 394 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL591167.1-201ENST00000607321 456 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AP000864.1-201ENST00000609424 650 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL354696.1-201ENST00000614652 497 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HERC6Q8IVU3 CUL4AP1-201ENST00000514750 1863 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 AL391261.1-201ENST00000555712 1479 ntBASIC6.73□□□□□ -1.33
HERC6Q8IVU3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC062022.1-201ENST00000451026 1684 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 MIR7-1-201ENST00000384871 110 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 RPS3AP2-201ENST00000407190 754 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 OR3A2-201ENST00000408891 1076 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 RPL35AP31-201ENST00000418340 337 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC007064.3-201ENST00000422608 359 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 RPL34P27-201ENST00000428810 349 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 TRIM60P13-201ENST00000432350 1283 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 Z85994.2-201ENST00000434327 452 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AL392003.1-201ENST00000434394 243 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC114878.1-201ENST00000441166 358 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC092865.4-201ENST00000477936 615 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC008410.1-201ENST00000483777 339 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 FTH1P8-201ENST00000498161 514 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC010343.2-201ENST00000510162 224 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 SETP21-201ENST00000514799 892 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 IGKV1D-22-201ENST00000518953 324 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 IGLV3-6-201ENST00000523937 250 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms