Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDH1Q08174 RN7SL835P-201ENST00000579920 262 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 AC061975.5-201ENST00000584928 1441 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 OR4F8P-201ENST00000589943 937 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 SLC25A36P1-201ENST00000590111 465 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 BNIP3P26-201ENST00000600827 554 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 AC009237.13-201ENST00000603193 276 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 AC091805.2-201ENST00000603848 235 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 AC023513.1-201ENST00000604396 691 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH1Q08174 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
PCDH1Q08174 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.14□□□□□ -1.27
PCDH1Q08174 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
PCDH1Q08174 RPSAP68-201ENST00000625020 438 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH1Q08174 AC099654.12-201ENST00000639868 649 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
PCDH1Q08174 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDH1Q08174 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDH1Q08174 UG0898H09-202ENST00000623646 7040 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.14□□□□□ -1.27
PCDH1Q08174 AL162171.3-201ENST00000617439 3178 ntBASIC7.14□□□□□ -1.27
PCDH1Q08174 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDH1Q08174 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC005539.1-201ENST00000443768 1479 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDH1Q08174 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 RNU2-66P-201ENST00000410650 161 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 TPMTP3-201ENST00000411928 735 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC000362.1-201ENST00000433725 425 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AL731892.1-201ENST00000437364 1192 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC097499.1-201ENST00000444277 208 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC010240.2-201ENST00000445363 1205 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AC023271.1-201ENST00000445936 1090 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 ZNF619P1-201ENST00000446539 752 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 VN1R34P-201ENST00000447387 883 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 ELOCP23-201ENST00000452014 332 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC147055.4-201ENST00000504399 745 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 MTND2P33-201ENST00000506452 1031 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 HSPE1P23-201ENST00000509838 286 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.13□□□□□ -1.27
PCDH1Q08174 RPS3AP4-201ENST00000555161 764 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 ZNF519P3-201ENST00000557158 1032 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC091304.4-201ENST00000565703 620 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AC092325.1-201ENST00000566449 554 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.13□□□□□ -1.27
PCDH1Q08174 MTCO1P40-201ENST00000574371 625 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC011374.2-201ENST00000607135 526 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AC025594.3-201ENST00000613068 790 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms