Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH12P55289 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 AC005000.1-201ENST00000536192 288 ntBASIC5.7□□□□□ -1.5
CDH12P55289 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH12P55289 AC037479.1-201ENST00000558361 625 ntBASIC5.7□□□□□ -1.5
CDH12P55289 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH12P55289 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH12P55289 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH12P55289 DYNLL1P1-201ENST00000595442 269 ntBASIC5.7□□□□□ -1.5
CDH12P55289 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AC074276.2-201ENST00000619891 348 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AL137067.2-201ENST00000621202 131 ntBASIC5.7□□□□□ -1.5
CDH12P55289 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH12P55289 MAPK10-350ENST00000641777 965 ntBASIC5.7□□□□□ -1.5
CDH12P55289 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 AC027575.3-201ENST00000583058 2747 ntBASIC5.7□□□□□ -1.5
CDH12P55289 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDH12P55289 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH12P55289 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH12P55289 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CDH12P55289 AMZ2P2-201ENST00000406819 1057 ntBASIC5.69□□□□□ -1.5
CDH12P55289 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH12P55289 DHFRP2-201ENST00000414224 547 ntBASIC5.69□□□□□ -1.5
CDH12P55289 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 AL354692.1-201ENST00000423044 315 ntBASIC5.69□□□□□ -1.5
CDH12P55289 RPS7P14-201ENST00000426405 583 ntBASIC5.69□□□□□ -1.5
CDH12P55289 AC128677.1-201ENST00000436016 442 ntBASIC5.69□□□□□ -1.5
CDH12P55289 EMC3-AS1-205ENST00000438698 534 ntBASIC5.69□□□□□ -1.5
CDH12P55289 COX4I1P2-201ENST00000447446 547 ntBASIC5.69□□□□□ -1.5
CDH12P55289 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 AC022730.1-201ENST00000473114 568 ntBASIC5.69□□□□□ -1.5
CDH12P55289 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 AC114324.2-202ENST00000503812 134 ntBASIC5.69□□□□□ -1.5
CDH12P55289 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH12P55289 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH12P55289 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH12P55289 AP003102.1-201ENST00000525638 661 ntBASIC5.69□□□□□ -1.5
CDH12P55289 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH12P55289 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 AC010547.7-201ENST00000570323 333 ntBASIC5.69□□□□□ -1.5
CDH12P55289 AC026898.1-201ENST00000586404 571 ntBASIC5.69□□□□□ -1.5
CDH12P55289 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH12P55289 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 BX284613.1-201ENST00000452221 1641 ntBASIC5.69□□□□□ -1.5
CDH12P55289 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH12P55289 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 KYNUP3-201ENST00000574386 1341 ntBASIC5.69□□□□□ -1.5
CDH12P55289 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH12P55289 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH12P55289 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 AC018628.1-201ENST00000624147 3819 ntBASIC5.68□□□□□ -1.5
CDH12P55289 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms