Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC58Q4VC31 AC130304.1-201ENST00000622942 2385 ntBASIC5.34□□□□□ -1.56
CCDC58Q4VC31 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
CCDC58Q4VC31 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC58Q4VC31 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC58Q4VC31 SOCS5P3-201ENST00000425115 1576 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL449283.1-201ENST00000602631 3403 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 RN7SKP74-201ENST00000362849 309 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 RNU105B-201ENST00000364478 208 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 MIR301B-201ENST00000390813 78 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 RPL11P3-201ENST00000395256 523 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL139135.1-201ENST00000412675 209 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 OR6C64P-201ENST00000419708 825 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC113412.1-201ENST00000425840 504 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL138479.1-201ENST00000426913 484 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 GTF3AP6-201ENST00000432585 986 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC112492.2-201ENST00000432774 1030 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 OR11I1P-201ENST00000486033 954 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL079303.1-201ENST00000486611 463 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC105391.1-201ENST00000503155 1045 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 Y_RNA.710-201ENST00000516975 110 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 RPL41P2-201ENST00000544920 409 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 OR4C49P-201ENST00000563891 900 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 ZNF322P1-201ENST00000568013 1209 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 AL121985.3-201ENST00000620690 523 ntBASIC5.33□□□□□ -1.56
CCDC58Q4VC31 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC58Q4VC31 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 AC092376.2-201ENST00000622621 4116 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 DHFRP2-201ENST00000414224 547 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 RPS15AP30-201ENST00000420976 390 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 GAPDHP37-201ENST00000442317 968 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 HIGD1AP16-201ENST00000450986 258 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 ACA64.4-201ENST00000459070 127 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 RPL12P24-201ENST00000474907 486 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 GLUD1P3-202ENST00000508551 200 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 RN7SKP288-201ENST00000516227 268 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms