Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 NPIPB14P-203ENST00000532298 987 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AL121594.2-201ENST00000541658 472 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.79□□□□□ -1.48
PKNOX1P55347 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.79□□□□□ -1.48
PKNOX1P55347 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.79□□□□□ -1.48
PKNOX1P55347 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.79□□□□□ -1.48
PKNOX1P55347 AC060780.2-201ENST00000589047 198 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AL080312.2-201ENST00000613001 630 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 AL357562.1-201ENST00000624911 609 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PKNOX1P55347 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PKNOX1P55347 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PKNOX1P55347 AC005261.2-201ENST00000593427 4258 ntBASIC5.79□□□□□ -1.48
PKNOX1P55347 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PKNOX1P55347 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PKNOX1P55347 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PKNOX1P55347 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.78□□□□□ -1.48
PKNOX1P55347 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.78□□□□□ -1.48
PKNOX1P55347 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 FTLP8-201ENST00000446770 267 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 RN7SL552P-201ENST00000462094 276 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 SNRPCP3-201ENST00000474888 476 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 PDCL3P4-201ENST00000489621 720 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC078899.1-201ENST00000521432 1185 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC110056.1-201ENST00000525759 911 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 AC090424.1-201ENST00000535243 736 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.78□□□□□ -1.48
PKNOX1P55347 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC090826.1-203ENST00000569235 490 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.78□□□□□ -1.48
PKNOX1P55347 WBP1LP11-201ENST00000586141 328 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.78□□□□□ -1.48
PKNOX1P55347 NDUFB9P1-201ENST00000604683 510 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 AC022001.1-201ENST00000605193 268 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 RFPL4AP6-201ENST00000616792 846 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 AL445670.1-201ENST00000618889 801 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.78□□□□□ -1.48
PKNOX1P55347 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
PKNOX1P55347 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 AC016745.2-201ENST00000608834 3443 ntBASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
PKNOX1P55347 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PKNOX1P55347 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PKNOX1P55347 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.78□□□□□ -1.48
PKNOX1P55347 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
PKNOX1P55347 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PKNOX1P55347 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PKNOX1P55347 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PKNOX1P55347 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PKNOX1P55347 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PKNOX1P55347 MIR188-201ENST00000385034 86 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 RPL11P3-201ENST00000395256 523 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.77□□□□□ -1.49
PKNOX1P55347 RN7SKP108-201ENST00000411367 328 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.77□□□□□ -1.49
PKNOX1P55347 AC099782.1-201ENST00000425889 474 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.77□□□□□ -1.49
PKNOX1P55347 BX276092.6-201ENST00000430476 250 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.77□□□□□ -1.49
PKNOX1P55347 AC064862.5-201ENST00000440618 334 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 AL663074.2-201ENST00000440621 479 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 FRG2FP-204ENST00000453982 852 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 BX276092.8-201ENST00000455722 250 ntBASIC5.77□□□□□ -1.49
PKNOX1P55347 AC004890.1-201ENST00000461005 181 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms