Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.8□□□□□ -1.32
CIITAP33076 AL138895.2-201ENST00000603019 178 ntBASIC6.8□□□□□ -1.32
CIITAP33076 AL365181.4-201ENST00000609800 547 ntBASIC6.8□□□□□ -1.32
CIITAP33076 MIR6778-201ENST00000617912 73 ntBASIC6.8□□□□□ -1.32
CIITAP33076 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.8□□□□□ -1.32
CIITAP33076 AC129778.1-202ENST00000623812 261 ntBASIC6.8□□□□□ -1.32
CIITAP33076 AL162377.2-201ENST00000624532 337 ntBASIC6.8□□□□□ -1.32
CIITAP33076 AL591379.1-207ENST00000635982 261 ntBASIC6.8□□□□□ -1.32
CIITAP33076 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.8□□□□□ -1.32
CIITAP33076 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.8□□□□□ -1.32
CIITAP33076 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 AL121768.1-201ENST00000613917 2544 ntBASIC6.8□□□□□ -1.32
CIITAP33076 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CIITAP33076 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CIITAP33076 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CIITAP33076 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CIITAP33076 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CIITAP33076 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.79□□□□□ -1.32
CIITAP33076 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.79□□□□□ -1.32
CIITAP33076 SELENOWP1-201ENST00000322792 252 ntBASIC6.79□□□□□ -1.32
CIITAP33076 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CIITAP33076 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CIITAP33076 RNU1-150P-201ENST00000362491 162 ntBASIC6.79□□□□□ -1.32
CIITAP33076 RNA5SP251-201ENST00000410614 137 ntBASIC6.79□□□□□ -1.32
CIITAP33076 BX284632.2-201ENST00000421091 399 ntBASIC6.79□□□□□ -1.32
CIITAP33076 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.79□□□□□ -1.32
CIITAP33076 AL731534.1-201ENST00000434711 269 ntBASIC6.79□□□□□ -1.32
CIITAP33076 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.79□□□□□ -1.32
CIITAP33076 AL512605.1-202ENST00000441919 381 ntBASIC6.79□□□□□ -1.32
CIITAP33076 AL359955.2-201ENST00000445380 353 ntBASIC6.79□□□□□ -1.32
CIITAP33076 AL162739.1-201ENST00000450606 307 ntBASIC6.79□□□□□ -1.32
CIITAP33076 AC104164.1-201ENST00000460282 590 ntBASIC6.79□□□□□ -1.32
CIITAP33076 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.79□□□□□ -1.32
CIITAP33076 Y_RNA.667-201ENST00000516212 107 ntBASIC6.79□□□□□ -1.32
CIITAP33076 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.79□□□□□ -1.32
CIITAP33076 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.79□□□□□ -1.32
CIITAP33076 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.79□□□□□ -1.32
CIITAP33076 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.79□□□□□ -1.32
CIITAP33076 AC067773.1-201ENST00000603284 1094 ntBASIC6.79□□□□□ -1.32
CIITAP33076 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CIITAP33076 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CIITAP33076 AL022323.4-201ENST00000623980 13120 ntBASIC6.79□□□□□ -1.32
CIITAP33076 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CIITAP33076 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
CIITAP33076 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.78□□□□□ -1.32
CIITAP33076 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 AC092724.1-201ENST00000624623 3397 ntBASIC6.78□□□□□ -1.32
CIITAP33076 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CIITAP33076 RNA5SP211-201ENST00000365516 117 ntBASIC6.78□□□□□ -1.32
CIITAP33076 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.78□□□□□ -1.32
CIITAP33076 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.78□□□□□ -1.32
CIITAP33076 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.78□□□□□ -1.32
CIITAP33076 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.78□□□□□ -1.32
CIITAP33076 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.78□□□□□ -1.32
CIITAP33076 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.78□□□□□ -1.32
CIITAP33076 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 AL445928.1-201ENST00000435545 222 ntBASIC6.78□□□□□ -1.32
CIITAP33076 RPS10P18-201ENST00000442662 495 ntBASIC6.78□□□□□ -1.32
CIITAP33076 RPS7P3-201ENST00000443360 580 ntBASIC6.78□□□□□ -1.32
CIITAP33076 RPL5P16-201ENST00000471467 790 ntBASIC6.78□□□□□ -1.32
CIITAP33076 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.78□□□□□ -1.32
CIITAP33076 AP000648.1-201ENST00000529682 397 ntBASIC6.78□□□□□ -1.32
CIITAP33076 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.78□□□□□ -1.32
CIITAP33076 NDUFA5P11-201ENST00000567995 343 ntBASIC6.78□□□□□ -1.32
CIITAP33076 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.78□□□□□ -1.32
CIITAP33076 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CIITAP33076 AC005520.3-201ENST00000602874 370 ntBASIC6.78□□□□□ -1.32
CIITAP33076 AL031601.1-201ENST00000605702 394 ntBASIC6.78□□□□□ -1.32
CIITAP33076 AC129915.3-201ENST00000634128 948 ntBASIC6.78□□□□□ -1.32
CIITAP33076 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.78□□□□□ -1.32
CIITAP33076 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CIITAP33076 AC114876.1-201ENST00000490962 1366 ntBASIC6.78□□□□□ -1.32
CIITAP33076 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CIITAP33076 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.78□□□□□ -1.32
CIITAP33076 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CIITAP33076 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
CIITAP33076 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
CIITAP33076 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CIITAP33076 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CIITAP33076 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CIITAP33076 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CIITAP33076 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms