Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC079776.5-201ENST00000641920 211 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC140479.2-201ENST00000421567 3130 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 AC004076.2-201ENST00000620532 3323 ntBASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAPPC4Q9Y296 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 GTF2IP4-201ENST00000453092 2054 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 SNORA21-201ENST00000362423 132 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 NPM1P18-201ENST00000434232 732 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AL731534.1-201ENST00000434711 269 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC099670.2-201ENST00000435130 321 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 GAPDHP59-201ENST00000435908 267 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 RPL5P25-201ENST00000441148 775 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 TRIM60P16-201ENST00000444048 694 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 RPL5P7-201ENST00000444235 813 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 RN7SL352P-201ENST00000466002 277 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AL117692.1-201ENST00000494283 713 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC112484.3-201ENST00000505910 329 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 HMGN1P17-201ENST00000513734 295 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 MAST4-IT1-201ENST00000514241 658 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 snoU109.5-201ENST00000516231 132 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 RNA5SP441-201ENST00000516809 88 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC244502.2-201ENST00000543361 851 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 MIR6721-201ENST00000617181 87 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC016542.2-201ENST00000624201 619 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC111152.1-202ENST00000635848 339 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AL357140.4-201ENST00000636827 412 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC090181.3-201ENST00000624777 1514 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 AC114774.1-201ENST00000507410 1770 ntBASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAPPC4Q9Y296 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 UGT2B24P-201ENST00000514441 1597 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 RNU105B-201ENST00000364478 208 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 RPS7P8-201ENST00000418311 581 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 RPL35AP31-201ENST00000418340 337 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AK3P5-201ENST00000432033 519 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 PSMD10P2-201ENST00000432890 672 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 KATNBL1P2-201ENST00000433311 835 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC002553.3-201ENST00000453002 341 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC112187.1-201ENST00000455837 479 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 YRDCP3-201ENST00000456507 480 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 TRBV5-2-201ENST00000489095 273 ntBASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAPPC4Q9Y296 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms