Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TREML3P-201ENST00000457327 501 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 HMGN1P8-201ENST00000463578 288 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 NPM1P28-201ENST00000492269 840 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC093870.1-201ENST00000506837 213 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 TPRX1P1-201ENST00000557620 319 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 LINC00556-201ENST00000569603 412 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC073046.2-201ENST00000604756 527 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC117490.2-201ENST00000610042 594 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 MIR6737-201ENST00000617385 70 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFT1Q96AA3 LINC02495-203ENST00000636704 242 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AL353743.3-201ENST00000442109 1468 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFT1Q96AA3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 AC093849.1-201ENST00000563631 2209 ntBASIC5.43□□□□□ -1.54
RFT1Q96AA3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.43□□□□□ -1.54
RFT1Q96AA3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AP001541.1-201ENST00000623322 1904 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 FANCD2P2-201ENST00000437591 1400 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 MTHFD2P5-201ENST00000320415 844 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 SNORD16-201ENST00000362803 99 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC092634.1-201ENST00000366505 199 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 RN7SKP221-201ENST00000410420 301 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL356968.2-201ENST00000412769 1257 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC098592.2-201ENST00000413158 265 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL589794.1-201ENST00000424971 390 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC093664.1-201ENST00000511779 289 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 NPM1P52-201ENST00000518264 846 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC114477.1-201ENST00000605097 605 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 MIR6849-201ENST00000618543 69 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL391597.1-201ENST00000618707 694 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AP000473.2-201ENST00000602659 1537 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC109446.4-201ENST00000623235 2755 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 SMG1P5-202ENST00000529428 4219 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 SMG1P2-201ENST00000566127 4221 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms