Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Vault.2-201ENST00000516519 98 ntBASIC5.92□□□□□ -1.46
CDH13P55290 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH13P55290 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH13P55290 CASP1P2-201ENST00000526830 1258 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AC244502.2-201ENST00000543361 851 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 AC005632.2-201ENST00000564271 828 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AL360012.1-201ENST00000602813 131 ntBASIC5.92□□□□□ -1.46
CDH13P55290 AL353729.2-201ENST00000605859 1249 ntBASIC5.92□□□□□ -1.46
CDH13P55290 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH13P55290 AL161756.3-201ENST00000641216 2071 ntBASIC5.92□□□□□ -1.46
CDH13P55290 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH13P55290 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH13P55290 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH13P55290 NAMPTP1-201ENST00000440465 2514 ntBASIC5.91□□□□□ -1.46
CDH13P55290 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH13P55290 SNORD1C-201ENST00000363315 78 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AL121977.1-201ENST00000401636 979 ntBASIC5.91□□□□□ -1.46
CDH13P55290 PRELID1P1-201ENST00000403549 660 ntBASIC5.91□□□□□ -1.46
CDH13P55290 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 AC096644.3-201ENST00000416788 338 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH13P55290 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 GAPDHP19-201ENST00000431768 1005 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AC010086.1-201ENST00000437359 1052 ntBASIC5.91□□□□□ -1.46
CDH13P55290 RPS19P6-201ENST00000441327 433 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AC245291.3-201ENST00000443400 292 ntBASIC5.91□□□□□ -1.46
CDH13P55290 snoU13.29-201ENST00000459370 104 ntBASIC5.91□□□□□ -1.46
CDH13P55290 RPL23AP40-201ENST00000487630 390 ntBASIC5.91□□□□□ -1.46
CDH13P55290 CCDC11P1-201ENST00000503137 1162 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH13P55290 AC095052.1-201ENST00000509955 863 ntBASIC5.91□□□□□ -1.46
CDH13P55290 TOMM22P4-201ENST00000511318 336 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH13P55290 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.91□□□□□ -1.46
CDH13P55290 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 AC021269.1-201ENST00000526860 705 ntBASIC5.91□□□□□ -1.46
CDH13P55290 OR4A42P-201ENST00000531397 938 ntBASIC5.91□□□□□ -1.46
CDH13P55290 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CDH13P55290 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH13P55290 RN7SL66P-201ENST00000582099 264 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH13P55290 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 AC245128.3-201ENST00000594721 748 ntBASIC5.91□□□□□ -1.46
CDH13P55290 RPSAP75-201ENST00000605848 301 ntBASIC5.91□□□□□ -1.46
CDH13P55290 uc_338.26-201ENST00000612659 160 ntBASIC5.91□□□□□ -1.46
CDH13P55290 AC009120.7-201ENST00000623452 780 ntBASIC5.91□□□□□ -1.46
CDH13P55290 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 MAPK10-350ENST00000641777 965 ntBASIC5.91□□□□□ -1.46
CDH13P55290 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDH13P55290 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH13P55290 AC015799.1-201ENST00000622996 3122 ntBASIC5.91□□□□□ -1.46
CDH13P55290 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH13P55290 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
CDH13P55290 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH13P55290 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH13P55290 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH13P55290 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH13P55290 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH13P55290 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CDH13P55290 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH13P55290 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH13P55290 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH13P55290 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH13P55290 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH13P55290 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.9□□□□□ -1.46
CDH13P55290 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH13P55290 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH13P55290 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
CDH13P55290 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH13P55290 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDH13P55290 RN7SKP144-201ENST00000411108 279 ntBASIC5.9□□□□□ -1.46
CDH13P55290 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.9□□□□□ -1.46
CDH13P55290 RPS15AP30-201ENST00000420976 390 ntBASIC5.9□□□□□ -1.46
CDH13P55290 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH13P55290 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms