Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PSMA6P2-201ENST00000457574 686 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 RPL31P3-201ENST00000458430 332 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC008410.1-201ENST00000483777 339 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC021220.1-201ENST00000507445 630 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 RPL7L1P7-201ENST00000509986 724 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC093752.1-206ENST00000511823 336 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC134698.4-201ENST00000523451 826 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AP000926.4-201ENST00000527351 454 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 DEFB131E-202ENST00000602581 683 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC096708.4-201ENST00000620563 552 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC005899.6-201ENST00000620729 297 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC131159.1-201ENST00000621854 213 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AP000676.3-201ENST00000623299 569 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC005355.2-201ENST00000625064 484 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC016251.2-201ENST00000623393 3089 ntBASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
FOXP3Q9BZS1 AC129502.1-201ENST00000623261 1654 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC104454.1-201ENST00000421341 1401 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AL359263.1-201ENST00000441188 2796 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RNU6-636P-201ENST00000384598 107 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RPS3AP5-201ENST00000389400 821 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 TRAV35-201ENST00000390462 330 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 Y_RNA.619-201ENST00000410951 90 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 Z68694.1-201ENST00000413929 841 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RAB9AP4-201ENST00000415230 609 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC134879.1-201ENST00000426062 394 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 MTCO1P43-201ENST00000431831 488 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 OSTCP2-201ENST00000437956 444 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC027124.1-201ENST00000440852 466 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC009237.4-201ENST00000441078 238 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RPL6P5-201ENST00000445678 828 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC009244.1-201ENST00000450566 258 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 ST13P21-201ENST00000453250 1098 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 RPL34P34-201ENST00000465389 354 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC034244.1-201ENST00000507687 207 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 GAPDHP71-201ENST00000511530 1003 ntBASIC7.12□□□□□ -1.27
FOXP3Q9BZS1 AC114940.1-201ENST00000512162 1265 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms